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Description : Rubisco accumulation factor 1.2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SR19]
Gene families : OG_42_0006514 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006514_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Arabidopsis release: At3g04550 | |
| Cluster | HCCA clusters: Cluster_96 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_27143 | No alias | rubisco accumulation factor 2, chloroplastic | 0.03 | Orthogroups_2024-Update | |
| Brara.F02900.1 | No alias | assembly factor involved in RuBisCo assembly *(RAF1) | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G457621 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
| HORVU1Hr1G037650.5 | No alias | assembly factor involved in RuBisCo assembly *(RAF1) | 0.02 | Orthogroups_2024-Update | |
| Potri.013G044900 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
| Seita.9G237700.1 | No alias | assembly factor involved in RuBisCo assembly *(RAF1) | 0.03 | Orthogroups_2024-Update | |
| Solyc11g006060 | No alias | Rubisco accumulation factor 1.1, chloroplastic (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Sopen11g002000 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Predicted GO |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0003860 | 3-hydroxyisobutyryl-CoA hydrolase activity | IEP | Predicted GO |
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Predicted GO |
| MF | GO:0004664 | prephenate dehydratase activity | IEP | Predicted GO |
| MF | GO:0004817 | cysteine-tRNA ligase activity | IEP | Predicted GO |
| CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
| BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
| BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006189 | 'de novo' IMP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006423 | cysteinyl-tRNA aminoacylation | IEP | Predicted GO |
| BP | GO:0006486 | protein glycosylation | IEP | Predicted GO |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0006558 | L-phenylalanine metabolic process | IEP | Predicted GO |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Predicted GO |
| BP | GO:0006952 | defense response | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | Predicted GO |
| BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
| MF | GO:0016157 | sucrose synthase activity | IEP | Predicted GO |
| MF | GO:0016289 | CoA hydrolase activity | IEP | Predicted GO |
| MF | GO:0016597 | amino acid binding | IEP | Predicted GO |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
| MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Predicted GO |
| MF | GO:0016790 | thiolester hydrolase activity | IEP | Predicted GO |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
| MF | GO:0031406 | carboxylic acid binding | IEP | Predicted GO |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
| MF | GO:0042802 | identical protein binding | IEP | Predicted GO |
| MF | GO:0042803 | protein homodimerization activity | IEP | Predicted GO |
| MF | GO:0043177 | organic acid binding | IEP | Predicted GO |
| CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Predicted GO |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
| BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Predicted GO |
| BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
| MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
| MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
| BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |