1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU3Hr1G022760.2

HORVU3Hr1G022760.2


Description : FRS/FRF-type transcription factor


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G022760.2
Cluster HCAA Clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
At1g52520 No alias Protein FAR1-RELATED SEQUENCE 6... 0.03 Orthogroups_2024-Update
GRMZM2G155980 No alias FAR1-related sequence 6 0.03 Orthogroups_2024-Update
Glyma.13G341600 No alias FAR1-related sequence 4 0.02 Orthogroups_2024-Update
LOC_Os06g07010 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g44170 No alias transposon protein, putative, unclassified, expressed 0.04 Orthogroups_2024-Update
Sobic.008G016300.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g110070 No alias Transposon-like element Lyt2-2 DNA (AHRD V3.3 *** D5MNY6_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 60 144
IPR018289 MULE_transposase_dom 265 359
No external refs found!