1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At3g04770

At3g04770


Description : 40S ribosomal protein SA [Source:UniProtKB/TrEMBL;Acc:F4J4W3]


Gene families : OG_42_0001668 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001668_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g04770
Cluster HCCA clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
36118 No alias 40s ribosomal protein SA 0.03 Orthogroups_2024-Update
Bradi1g20880 No alias 40s ribosomal protein SA B 0.05 Orthogroups_2024-Update
Bradi1g23780 No alias 40s ribosomal protein SA B 0.05 Orthogroups_2024-Update
Bradi1g60310 No alias 40s ribosomal protein SA B 0.03 Orthogroups_2024-Update
Bradi1g72480 No alias 40s ribosomal protein SA B 0.04 Orthogroups_2024-Update
Brara.B02024.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.G03124.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Cre10.g432800 No alias 40s ribosomal protein SA B 0.02 Orthogroups_2024-Update
GRMZM2G126821 No alias 40s ribosomal protein SA B 0.04 Orthogroups_2024-Update
GRMZM2G159237 No alias 40s ribosomal protein SA B 0.04 Orthogroups_2024-Update
Glyma.07G043800 No alias 40s ribosomal protein SA B 0.03 Orthogroups_2024-Update
Glyma.08G159800 No alias 40s ribosomal protein SA B 0.04 Orthogroups_2024-Update
Glyma.15G267100 No alias 40s ribosomal protein SA B 0.03 Orthogroups_2024-Update
Glyma.16G012200 No alias 40s ribosomal protein SA B 0.03 Orthogroups_2024-Update
Potri.003G071200 No alias 40s ribosomal protein SA B 0.03 Orthogroups_2024-Update
Pp1s48_103V6 No alias 40s ribosomal protein sa 0.02 Orthogroups_2024-Update
Seita.2G389700.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Seita.9G517100.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Sobic.002G374900.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.002G375100.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Solyc06g072120 No alias 40S ribosomal protein SA (AHRD V3.3 *** K4C8T4_SOLLC) 0.03 Orthogroups_2024-Update
Sopen03g029850 No alias Ribosomal protein S2 0.02 Orthogroups_2024-Update
evm.model.contig_4456.25 No alias (o22518|rssa_soybn : 282.0) 40S ribosomal protein SA... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019211 phosphatase activator activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 23 118
IPR001865 Ribosomal_S2 122 187
No external refs found!