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  5. At3g04920

At3g04920


Description : 40S ribosomal protein S24-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS17]


Gene families : OG_42_0001483 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g04920
Cluster HCCA clusters: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
271584 No alias Ribosomal protein S24e family protein 0.04 Orthogroups_2024-Update
Bradi3g08680 No alias Ribosomal protein S24e family protein 0.04 Orthogroups_2024-Update
Brara.B03525.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Brara.F02892.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Brara.I00438.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Cre10.g456200 No alias Ribosomal protein S24e family protein 0.09 Orthogroups_2024-Update
GRMZM2G171426 No alias Ribosomal protein S24e family protein 0.02 Orthogroups_2024-Update
Glyma.10G160300 No alias Ribosomal protein S24e family protein 0.07 Orthogroups_2024-Update
Glyma.19G242700 No alias Ribosomal protein S24e family protein 0.03 Orthogroups_2024-Update
Glyma.20G228100 No alias Ribosomal protein S24e family protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G044840.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
HORVU7Hr1G088580.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Kfl00638_0040 kfl00638_0040_v1.1 (at3g04920 : 195.0) Ribosomal protein S24e family... 0.02 Orthogroups_2024-Update
LOC_Os06g36160 No alias 40S ribosomal protein S24, putative, expressed 0.03 Orthogroups_2024-Update
MA_119894g0010 No alias (at3g04920 : 188.0) Ribosomal protein S24e family... 0.03 Orthogroups_2024-Update
PSME_00005358-RA No alias (at3g04920 : 189.0) Ribosomal protein S24e family... 0.06 Orthogroups_2024-Update
Potri.010G087800 No alias Ribosomal protein S24e family protein 0.03 Orthogroups_2024-Update
Potri.013G036100 No alias Ribosomal protein S24e family protein 0.04 Orthogroups_2024-Update
Pp1s204_49V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s37_112V6 No alias 40s ribosomal protein 0.06 Orthogroups_2024-Update
Pp1s450_3V6 No alias 40s ribosomal protein 0.02 Orthogroups_2024-Update
Pp1s450_9V6 No alias 40s ribosomal protein 0.07 Orthogroups_2024-Update
Seita.4G181700.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Seita.5G301700.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.003G280700.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Sobic.004G099500.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Sobic.010G166100.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Solyc06g084230 No alias 40S ribosomal protein S24 (AHRD V3.3 *** K4CUG0_SOLLC) 0.03 Orthogroups_2024-Update
Solyc09g065330 No alias 40S ribosomal protein S24 (AHRD V3.3 *** K4CAS8_SOLLC) 0.06 Orthogroups_2024-Update
Sopen09g027090 No alias Ribosomal protein S24e 0.06 Orthogroups_2024-Update
evm.model.contig_2036.17 No alias (at3g04920 : 137.0) Ribosomal protein S24e family... 0.06 Orthogroups_2024-Update
evm.model.tig00000361.64 No alias (at3g04920 : 129.0) Ribosomal protein S24e family... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001976 Ribosomal_S24e 25 103
No external refs found!