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  5. HORVU3Hr1G030870.1

HORVU3Hr1G030870.1


Description : transcriptional co-regulator *(OFP)


Gene families : OG_42_0000150 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000150_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G030870.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
A4A49_12744 No alias transcription repressor ofp4 0.03 Orthogroups_2024-Update
Bradi4g42080 No alias ovate family protein 6 0.03 Orthogroups_2024-Update
Glyma.08G038400 No alias ovate family protein 8 0.03 Orthogroups_2024-Update
Glyma.10G077800 No alias Ovate family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G049440.1 No alias transcriptional co-regulator *(OFP) 0.03 Orthogroups_2024-Update
HORVU1Hr1G069900.1 No alias transcriptional co-regulator *(OFP) 0.02 Orthogroups_2024-Update
LOC_Os01g43610 No alias DUF623 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_23257g0010 No alias (at1g06920 : 103.0) ovate family protein 4 (OFP4);... 0.03 Orthogroups_2024-Update
MA_31710g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Seita.9G504200.1 No alias transcriptional co-regulator *(OFP) 0.03 Orthogroups_2024-Update
Sobic.004G282200.2 No alias transcriptional co-regulator *(OFP) 0.04 Orthogroups_2024-Update
Solyc02g085500 No alias ovate 0.02 Orthogroups_2024-Update
Solyc11g068780 No alias LOW QUALITY:ovate family protein 30 0.02 Orthogroups_2024-Update
Sopen06g029390 No alias Transcriptional repressor, ovate 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006458 Ovate_C 299 355
No external refs found!