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  5. HORVU3Hr1G032170.1

HORVU3Hr1G032170.1


Description : NLP-type transcription factor & nitrate response transcription factor *(NLP6/7) & transcription factor *(NIN)


Gene families : OG_42_0000432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G032170.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Brara.A01407.1 No alias NLP-type transcription factor & nitrate response... 0.03 Orthogroups_2024-Update
Glyma.09G137000 No alias NIN like protein 7 0.02 Orthogroups_2024-Update
Sobic.003G003600.1 No alias NLP-type transcription factor & nitrate response... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000270 PB1_dom 843 924
IPR003035 RWP-RK_dom 590 638
No external refs found!