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  5. HORVU3Hr1G034030.1

HORVU3Hr1G034030.1


Description : alpha-class expansin


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G034030.1
Cluster HCAA Clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
A4A49_21927 No alias expansin-a7 0.06 Orthogroups_2024-Update
Brara.H03119.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
HORVU0Hr1G032890.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g31480 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00025835-RA No alias (at1g26770 : 394.0) Encodes an expansin. Naming... 0.04 Orthogroups_2024-Update
PSME_00045415-RA No alias (at4g01630 : 291.0) member of Alpha-Expansin Gene... 0.04 Orthogroups_2024-Update
Solyc09g010860 No alias expansin precursor 4 0.04 Orthogroups_2024-Update
Solyc09g018020 No alias Expansin (AHRD V3.3 *** G4XZW3_9GENT) 0.03 Orthogroups_2024-Update
Sopen02g025850 No alias Pollen allergen 0.02 Orthogroups_2024-Update
Sopen02g032810 No alias Pollen allergen 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 192 269
IPR009009 RlpA-like_DPBB 94 181
No external refs found!