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  5. HORVU3Hr1G055990.1

HORVU3Hr1G055990.1


Description : large subunit beta of AP-4 vacuole cargo adaptor complex


Gene families : OG_42_0001931 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001931_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G055990.1
Cluster HCAA Clusters: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62210 No alias Adaptin family protein 0.04 Orthogroups_2024-Update
Glyma.06G081600 No alias adaptin family protein 0.03 Orthogroups_2024-Update
Glyma.12G021600 No alias Adaptin family protein 0.02 Orthogroups_2024-Update
LOC_Os03g23950 No alias adapitin protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434151g0010 No alias (at4g11380 : 681.0) Adaptin family protein; FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00013828-RA No alias (at4g11380 : 1413.0) Adaptin family protein; FUNCTIONS... 0.03 Orthogroups_2024-Update
Pp1s43_137V6 No alias ap-2 complex subunit beta- 0.02 Orthogroups_2024-Update
Seita.5G233700.1 No alias large subunit beta of AP-4 vacuole cargo adaptor complex 0.02 Orthogroups_2024-Update
Seita.9G401000.1 No alias large subunit beta of AP-2 cargo adaptor complex & large... 0.04 Orthogroups_2024-Update
evm.model.tig00020592.38 No alias (at4g11380 : 730.0) Adaptin family protein; FUNCTIONS... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA 16Dec
BP GO:0016192 vesicle-mediated transport IEA 16Dec
CC GO:0030117 membrane coat IEA 16Dec
CC GO:0030131 clathrin adaptor complex IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR015151 B-adaptin_app_sub_C 750 862
IPR002553 Clathrin/coatomer_adapt-like_N 55 579
No external refs found!