1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g079910

Solyc03g079910


Description : Protein DA1-related 1 (AHRD V3.3 *** A0A199UXH9_ANACO)


Gene families : OG_42_0000650 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g079910
Cluster HCCA clusters: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
Bradi5g01160 No alias DA1 0.03 Orthogroups_2024-Update
GRMZM2G017845 No alias DA1 0.02 Orthogroups_2024-Update
HORVU4Hr1G011730.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Kfl00898_0030 kfl00898_0030_v1.... (at4g36860 : 358.0) LIM domain-containing protein;... 0.02 Orthogroups_2024-Update
LOC_Os06g08400 No alias LIM domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001781 Znf_LIM 187 226
IPR022087 DA1-like 336 544
No external refs found!