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Description : Unknown function
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU3Hr1G058070.2 | |
| Cluster | HCAA Clusters: Cluster_108 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 52147 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | Orthogroups_2024-Update | |
| 93439 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| At3g11460 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Orthogroups_2024-Update | |
| Bradi2g25480 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g04890 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g50980 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g55520 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.H03086.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G001466 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G121579 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G462417 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.04G203500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G061600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G028520.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU3Hr1G061600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G085770.2 | No alias | RNA editing factor *(CRR2) | 0.03 | Orthogroups_2024-Update | |
| HORVU4Hr1G067540.5 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| LOC_Os01g72930 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g13230 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os11g44930 | No alias | pentatricopeptide repeat domain containing protein,... | 0.05 | Orthogroups_2024-Update | |
| MA_472579g0010 | No alias | (at4g33170 : 615.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00057163-RA | No alias | (at1g11290 : 707.0) Pentatricopeptide Repeat Protein... | 0.05 | Orthogroups_2024-Update | |
| Potri.002G014800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s103_35V6 | No alias | MZB10.7; pentatricopeptide (PPR) repeat-containing... | 0.03 | Orthogroups_2024-Update | |
| Seita.1G076000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.2G177900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Seita.2G203900.1 | No alias | RNA editing factor *(OTP87) | 0.03 | Orthogroups_2024-Update | |
| Seita.4G216600.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.4G225800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.5G124400.1 | No alias | RNA editing factor *(OTP81) | 0.04 | Orthogroups_2024-Update | |
| Seita.5G326600.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.9G355700.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Seita.9G477500.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Sobic.002G384800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc03g096610 | No alias | Pentatricopeptide repeat (PPR) superfamily protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Solyc07g009220 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.04 | Orthogroups_2024-Update | |
| Sopen01g038950 | No alias | PPR repeat | 0.04 | Orthogroups_2024-Update | |
| Sopen11g009180 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 362 | 388 |
| IPR002885 | Pentatricopeptide_repeat | 464 | 488 |
| IPR002885 | Pentatricopeptide_repeat | 391 | 417 |
| IPR002885 | Pentatricopeptide_repeat | 564 | 588 |
| IPR002885 | Pentatricopeptide_repeat | 262 | 285 |
| IPR002885 | Pentatricopeptide_repeat | 491 | 538 |
| IPR002885 | Pentatricopeptide_repeat | 186 | 233 |
| IPR002885 | Pentatricopeptide_repeat | 82 | 124 |
| IPR002885 | Pentatricopeptide_repeat | 288 | 335 |
| No external refs found! |