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  5. At3g06080

At3g06080


Description : Protein trichome birefringence-like 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDG2]


Gene families : OG_42_0000293 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g06080
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Brara.C03140.1 No alias rhamnogalacturonan-I O-acetyltransferase *(TBL) 0.02 Orthogroups_2024-Update
GRMZM2G077437 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update
Glyma.02G171200 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
Glyma.19G149100 No alias Plant protein of unknown function (DUF828) 0.04 Orthogroups_2024-Update
MA_10436708g0010 No alias (at3g62390 : 299.0) Encodes a member of the TBL... 0.02 Orthogroups_2024-Update
MA_128999g0010 No alias (at5g19160 : 318.0) Encodes a member of the TBL... 0.04 Orthogroups_2024-Update
Potri.006G193900 No alias Plant protein of unknown function (DUF828) 0.04 Orthogroups_2024-Update
Pp1s309_78V6 No alias af361591_1 at5g06230 mbl20_11 0.03 Orthogroups_2024-Update
Seita.4G085000.1 No alias polysaccharide O-acetyltransferase *(TBR) 0.01 Orthogroups_2024-Update
Solyc01g079400 No alias TRICHOME BIREFRINGENCE-LIKE 6 (AHRD V3.3 *** AT3G62390.1) 0.03 Orthogroups_2024-Update
Sopen01g031190 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update
Sopen09g026770 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update
Sopen10g029530 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 102 154
IPR026057 PC-Esterase 155 340
No external refs found!