1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU3Hr1G065240.1

HORVU3Hr1G065240.1


Description : subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G065240.1
Cluster HCAA Clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G004748 No alias P-glycoprotein 2 0.03 Orthogroups_2024-Update
Kfl00008_0360 kfl00008_0360_v1.1 (at1g02520 : 1200.0) P-glycoprotein 11 (PGP11);... 0.01 Orthogroups_2024-Update
LOC_Os04g38570 No alias multidrug resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g04610 No alias ABC transporter, ATP-binding protein, putative, expressed 0.05 Orthogroups_2024-Update
Mp1g26440.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Mp2g02910.1 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Mp2g11920.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
PSME_00011041-RA No alias (at4g25960 : 1546.0) P-glycoprotein 2 (PGP2); FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00030174-RA No alias (at2g47000 : 1538.0) Multidrug resistance ... 0.03 Orthogroups_2024-Update
Potri.010G003000 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Potri.011G133800 No alias P-glycoprotein 18 0.03 Orthogroups_2024-Update
Potri.017G081100 No alias ATP binding cassette subfamily B19 0.03 Orthogroups_2024-Update
Potri.018G087100 No alias ABC transporter family protein 0.02 Orthogroups_2024-Update
Pp1s173_145V6 No alias multidrug resistance protein 0.02 Orthogroups_2024-Update
Seita.1G145300.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.003G180400.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Sobic.006G105600.1 No alias auxin efflux transporter *(ABCB19) & subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Solyc06g009290 No alias ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR) 0.04 Orthogroups_2024-Update
Solyc07g018130 No alias ABC transporter B family protein (AHRD V3.3 *** G7JF16_MEDTR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 48 320
IPR011527 ABC1_TM_dom 698 971
IPR003439 ABC_transporter-like 1039 1188
IPR003439 ABC_transporter-like 387 536
No external refs found!