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  5. HORVU3Hr1G065280.5

HORVU3Hr1G065280.5


Description : subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G065280.5
Cluster HCAA Clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
PSME_00017831-RA No alias (at2g47000 : 822.0) Multidrug resistance P-glycoprotein... 0.03 Orthogroups_2024-Update
Seita.5G470000.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Solyc06g009290 No alias ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 685 957
IPR011527 ABC1_TM_dom 42 309
IPR003439 ABC_transporter-like 377 526
IPR003439 ABC_transporter-like 1027 1175
No external refs found!