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  5. HORVU3Hr1G067620.1

HORVU3Hr1G067620.1


Description : alpha amylase


Gene families : OG_42_0000605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G067620.1
Cluster HCAA Clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Glyma.18G125300 No alias alpha-amylase-like 3 0.02 Orthogroups_2024-Update
Kfl00228_0110 kfl00228_0110_v1.1 (p04063|amy2_horvu : 536.0) Alpha-amylase type B isozyme... 0.02 Orthogroups_2024-Update
LOC_Os01g51754 No alias alpha-amylase precursor, putative, expressed 0.02 Orthogroups_2024-Update
Mp1g24800.1 No alias alpha amylase 0.02 Orthogroups_2024-Update
PSME_00021432-RA No alias (p27937|amy3b_orysa : 503.0) Alpha-amylase isozyme 3B... 0.03 Orthogroups_2024-Update
PSME_00029785-RA No alias (at1g69830 : 330.0) Encodes a plastid-localized... 0.02 Orthogroups_2024-Update
PSME_00029786-RA No alias (at1g69830 : 387.0) Encodes a plastid-localized... 0.03 Orthogroups_2024-Update
Potri.002G014300 No alias alpha-amylase-like 2 0.03 Orthogroups_2024-Update
Potri.017G093200 No alias alpha-amylase-like 3 0.02 Orthogroups_2024-Update
Pp1s223_59V6 No alias pentatricopeptide repeat-containing 0.02 Orthogroups_2024-Update
Sobic.004G309000.1 No alias alpha amylase 0.03 Orthogroups_2024-Update
Sopen02g016140 No alias Alpha amylase, catalytic domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEA 16Dec
MF GO:0005509 calcium ion binding IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 812 867
IPR006047 Glyco_hydro_13_cat_dom 506 759
No external refs found!