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  5. HORVU3Hr1G067650.1

HORVU3Hr1G067650.1


Description : Unknown function


Gene families : OG_42_0010960 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010960_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G067650.1
Cluster HCAA Clusters: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
Bradi2g48180 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os01g51790 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_56714g0010 No alias (at3g12770 : 596.0) Encodes a pentatricopeptide repeat... 0.04 Orthogroups_2024-Update
PSME_00016520-RA No alias (at3g57430 : 508.0) Encodes a chloroplast RNA editing... 0.06 Orthogroups_2024-Update
Seita.5G295500.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
BP GO:0032392 DNA geometric change IEP Predicted GO
BP GO:0032508 DNA duplex unwinding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 537 629
IPR002885 Pentatricopeptide_repeat 192 220
IPR002885 Pentatricopeptide_repeat 396 421
IPR002885 Pentatricopeptide_repeat 322 368
IPR002885 Pentatricopeptide_repeat 221 268
No external refs found!