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Description : mRNA decay factor *(PAT1)
Gene families : OG_42_0001618 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001618_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU3Hr1G074770.1 | |
| Cluster | HCAA Clusters: Cluster_30 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi4g36450 | No alias | Function unknown | 0.02 | Orthogroups_2024-Update | |
| Glyma.15G255200 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
| Kfl00377_0140 | kfl00377_0140_v1.1 | (at1g79090 : 251.0) FUNCTIONS IN: molecular_function... | 0.02 | Orthogroups_2024-Update | |
| LOC_Os02g19330 | No alias | expressed protein | 0.02 | Orthogroups_2024-Update | |
| Sopen12g002360 | No alias | hypothetical protein | 0.05 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
| MF | GO:0004143 | diacylglycerol kinase activity | IEP | Predicted GO |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| BP | GO:0006479 | protein methylation | IEP | Predicted GO |
| BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
| BP | GO:0007010 | cytoskeleton organization | IEP | Predicted GO |
| BP | GO:0007165 | signal transduction | IEP | Predicted GO |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Predicted GO |
| BP | GO:0007205 | protein kinase C-activating G protein-coupled receptor signaling pathway | IEP | Predicted GO |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
| BP | GO:0008213 | protein alkylation | IEP | Predicted GO |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Predicted GO |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009314 | response to radiation | IEP | Predicted GO |
| BP | GO:0009416 | response to light stimulus | IEP | Predicted GO |
| BP | GO:0009581 | detection of external stimulus | IEP | Predicted GO |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Predicted GO |
| BP | GO:0009583 | detection of light stimulus | IEP | Predicted GO |
| BP | GO:0009584 | detection of visible light | IEP | Predicted GO |
| BP | GO:0009605 | response to external stimulus | IEP | Predicted GO |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Predicted GO |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
| MF | GO:0010181 | FMN binding | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016301 | kinase activity | IEP | Predicted GO |
| BP | GO:0016571 | histone methylation | IEP | Predicted GO |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
| MF | GO:0016740 | transferase activity | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Predicted GO |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Predicted GO |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Predicted GO |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Predicted GO |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0034968 | histone lysine methylation | IEP | Predicted GO |
| MF | GO:0035299 | inositol pentakisphosphate 2-kinase activity | IEP | Predicted GO |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Predicted GO |
| BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:0051606 | detection of stimulus | IEP | Predicted GO |
| BP | GO:0065007 | biological regulation | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |