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  5. HORVU3Hr1G076940.13

HORVU3Hr1G076940.13


Description : cyclic nucleotide-gated cation channel *(CNGC)


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G076940.13
Cluster HCAA Clusters: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Brara.E02422.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
LOC_Os12g28260 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00037092-RA No alias (at5g54250 : 808.0) member of Cyclic nucleotide gated... 0.04 Orthogroups_2024-Update
Solyc03g098210 No alias Cyclic nucleotide gated channel CNGC15 (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA 16Dec
BP GO:0006811 ion transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0009975 cyclase activity IEP Predicted GO
MF GO:0009976 tocopherol cyclase activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 209 428
No external refs found!