HORVU3Hr1G079800.1

Description : arabinogalactan protein *(Xylogen)

Gene families : OG_42_0000300 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000300_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU3Hr1G079800.1
Cluster	HCAA Clusters: Cluster_159

Target	Alias	Description	ECC score	Gene Family Method
A4A49_28568	No alias	non-specific lipid transfer protein gpi-anchored 2	0.03	Orthogroups_2024-Update
A4A49_34683	No alias	non-specific lipid-transfer protein-like protein	0.03	Orthogroups_2024-Update
GRMZM2G004466	No alias	Bifunctional inhibitor/lipid-transfer protein/seed...	0.02	Orthogroups_2024-Update
PSME_00020969-RA	No alias	(at3g22600 : 105.0) Bifunctional...	0.02	Orthogroups_2024-Update
PSME_00039935-RA	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
Potri.004G196000	No alias	Bifunctional inhibitor/lipid-transfer protein/seed...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0000776	kinetochore	IEP	Predicted GO
BP	GO:0001101	response to acid chemical	IEP	Predicted GO
MF	GO:0003779	actin binding	IEP	Predicted GO
BP	GO:0007010	cytoskeleton organization	IEP	Predicted GO
BP	GO:0009415	response to water	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
BP	GO:0010035	response to inorganic substance	IEP	Predicted GO
CC	GO:0031262	Ndc80 complex	IEP	Predicted GO
CC	GO:0044427	chromosomal part	IEP	Predicted GO
BP	GO:1901700	response to oxygen-containing compound	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR016140	Bifunc_inhib/LTP/seed_store	129	217

External Links

No external refs found!