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  5. HORVU3Hr1G080040.2

HORVU3Hr1G080040.2


Description : E3 ubiquitin ligase *(AIRP1)


Gene families : OG_42_0000832 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000832_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G080040.2

Target Alias Description ECC score Gene Family Method Actions
Bradi4g12920 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
PSME_00001126-RA No alias (at4g00335 : 101.0) RING-H2 finger B1A (RHB1A);... 0.02 Orthogroups_2024-Update
Sobic.005G194700.2 No alias E3 ubiquitin ligase *(AIRP1) 0.04 Orthogroups_2024-Update
Sopen01g038620 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 149 191
No external refs found!