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  5. HORVU3Hr1G084640.7

HORVU3Hr1G084640.7


Description : subcluster CPL phosphatase & group-I RNA polymerase-II phosphatase & phosphatase component *(CPL) of chromatin silencing regulator complex


Gene families : OG_42_0002313 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002313_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G084640.7
Cluster HCAA Clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Bradi5g16462 No alias C-terminal domain phosphatase-like 1 0.06 Orthogroups_2024-Update
Glyma.07G194800 No alias C-terminal domain phosphatase-like 1 0.03 Orthogroups_2024-Update
PSME_00014657-RA No alias (at4g21670 : 514.0) encodes a a novel transcriptional... 0.02 Orthogroups_2024-Update
Potri.011G049400 No alias C-terminal domain phosphatase-like 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 592 636
IPR004274 FCP1_dom 317 429
No external refs found!