1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU3Hr1G084670.24

HORVU3Hr1G084670.24


Description : subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G084670.24
Cluster HCAA Clusters: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
At1g27940 No alias PGP13 [Source:UniProtKB/TrEMBL;Acc:A0A178W4F4] 0.03 Orthogroups_2024-Update
GRMZM2G119894 No alias P-glycoprotein 21 0.02 Orthogroups_2024-Update
GRMZM5G833207 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Glyma.08G270300 No alias P-glycoprotein 2 0.04 Orthogroups_2024-Update
Glyma.13G118900 No alias P-glycoprotein 11 0.02 Orthogroups_2024-Update
HORVU7Hr1G071870.23 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os01g34970 No alias MDR-like ABC transporter, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g05710 No alias ABC transporter, ATP-binding protein, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
CC GO:0070939 Dsl1/NZR complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 2 98
IPR003439 ABC_transporter-like 169 318
No external refs found!