HORVU3Hr1G086410.2

Description : component *(eL36) of large ribosomal-subunit (LSU) proteome

Gene families : OG_42_0001685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001685_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU3Hr1G086410.2
Cluster	HCAA Clusters: Cluster_238

Target	Alias	Description	ECC score	Gene Family Method
At2g37600	No alias	60S ribosomal protein L36-1...	0.03	Orthogroups_2024-Update
Brara.C01889.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Brara.D02287.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Brara.E00749.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Cre12.g484050	No alias	Ribosomal protein L36e family protein	0.02	Orthogroups_2024-Update
Glyma.10G233900	No alias	Ribosomal protein L36e family protein	0.05	Orthogroups_2024-Update
HORVU1Hr1G072270.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
MA_10430792g0010	No alias	(at3g53740 : 140.0) Ribosomal protein L36e family...	0.02	Orthogroups_2024-Update
Mp1g05460.1	No alias	component RPL36 of LSU proteome component	0.03	Orthogroups_2024-Update
PSME_00032528-RA	No alias	(at3g53740 : 137.0) Ribosomal protein L36e family...	0.04	Orthogroups_2024-Update
PSME_00032530-RA	No alias	(at3g53740 : 141.0) Ribosomal protein L36e family...	0.06	Orthogroups_2024-Update
Pp1s249_65V6	No alias	60s ribosomal protein l36-2	0.04	Orthogroups_2024-Update
Pp1s34_151V6	No alias	60s ribosomal protein l36-2	0.02	Orthogroups_2024-Update
Pp1s84_102V6	No alias	60s ribosomal protein l36-2	0.03	Orthogroups_2024-Update
Sobic.003G351000.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Sobic.009G163800.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Solyc03g025520	No alias	60S ribosomal protein L36 (AHRD V3.3 *** K4BF25_SOLLC)	0.05	Orthogroups_2024-Update
Sopen03g004360	No alias	Ribosomal protein L36e	0.05	Orthogroups_2024-Update
Sopen06g011800	No alias	Ribosomal protein L36e	0.02	Orthogroups_2024-Update
evm.model.contig_3387.3	No alias	(at2g37600 : 125.0) Ribosomal protein L36e family...	0.02	Orthogroups_2024-Update
evm.model.tig00021493.69	No alias	(at2g37600 : 127.0) Ribosomal protein L36e family...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
CC	GO:0000439	transcription factor TFIIH core complex	IEP	Predicted GO
BP	GO:0001510	RNA methylation	IEP	Predicted GO
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Predicted GO
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predicted GO
CC	GO:0005667	transcription factor complex	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006289	nucleotide-excision repair	IEP	Predicted GO
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
BP	GO:0006400	tRNA modification	IEP	Predicted GO
BP	GO:0006405	RNA export from nucleus	IEP	Predicted GO
BP	GO:0006406	mRNA export from nucleus	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
CC	GO:0008541	proteasome regulatory particle, lid subcomplex	IEP	Predicted GO
BP	GO:0015931	nucleobase-containing compound transport	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016859	cis-trans isomerase activity	IEP	Predicted GO
BP	GO:0030488	tRNA methylation	IEP	Predicted GO
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEP	Predicted GO
BP	GO:0034470	ncRNA processing	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
CC	GO:0034708	methyltransferase complex	IEP	Predicted GO
BP	GO:0043248	proteasome assembly	IEP	Predicted GO
CC	GO:0043527	tRNA methyltransferase complex	IEP	Predicted GO
CC	GO:0044798	nuclear transcription factor complex	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
BP	GO:0050657	nucleic acid transport	IEP	Predicted GO
BP	GO:0050658	RNA transport	IEP	Predicted GO
BP	GO:0051028	mRNA transport	IEP	Predicted GO
BP	GO:0051168	nuclear export	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO
BP	GO:0051236	establishment of RNA localization	IEP	Predicted GO
BP	GO:0071702	organic substance transport	IEP	Predicted GO
BP	GO:0071705	nitrogen compound transport	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
CC	GO:0090575	RNA polymerase II transcription factor complex	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000509	Ribosomal_L36e	8	101

External Links

No external refs found!

HORVU3Hr1G086410.2

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation