Description : component *(uS8) of small ribosomal-subunit (SSU) proteome
Gene families : OG_42_0001161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001161_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Hordeum vulgare: HORVU3Hr1G086930.1 | |
Cluster | HCAA Clusters: Cluster_168 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
228163 | No alias | Ribosomal protein S8 family protein | 0.06 | Orthogroups_2024-Update | |
At5g59850 | No alias | AT1G07770 protein [Source:UniProtKB/TrEMBL;Acc:B9DI04] | 0.04 | Orthogroups_2024-Update | |
Bradi2g23110 | No alias | ribosomal protein S15A | 0.12 | Orthogroups_2024-Update | |
Bradi2g54450 | No alias | ribosomal protein S15A | 0.14 | Orthogroups_2024-Update | |
Brara.B01062.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.14 | Orthogroups_2024-Update | |
Brara.C01067.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.19 | Orthogroups_2024-Update | |
Brara.F00468.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.12 | Orthogroups_2024-Update | |
Brara.J01354.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.07 | Orthogroups_2024-Update | |
Cre05.g234637 | No alias | Ribosomal protein S8 family protein | 0.12 | Orthogroups_2024-Update | |
GRMZM2G083497 | No alias | ribosomal protein S15A | 0.09 | Orthogroups_2024-Update | |
Glyma.07G255500 | No alias | ribosomal protein S15A | 0.06 | Orthogroups_2024-Update | |
Glyma.11G003600 | No alias | ribosomal protein S15A | 0.05 | Orthogroups_2024-Update | |
Glyma.11G003700 | No alias | ribosomal protein S15A | 0.05 | Orthogroups_2024-Update | |
Glyma.15G102550 | No alias | ribosomal protein S15A | 0.06 | Orthogroups_2024-Update | |
Glyma.17G018600 | No alias | ribosomal protein S15A | 0.1 | Orthogroups_2024-Update | |
HORVU1Hr1G072060.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.07 | Orthogroups_2024-Update | |
Kfl00864_0040 | kfl00864_0040_v1.1 | (at5g59850 : 230.0) Ribosomal protein S8 family protein;... | 0.04 | Orthogroups_2024-Update | |
LOC_Os02g27760 | No alias | 40S ribosomal protein S15a, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os07g10720 | No alias | 40S ribosomal protein S15a, putative, expressed | 0.04 | Orthogroups_2024-Update | |
MA_10427318g0020 | No alias | (at3g46040 : 214.0) Regulated by TCP20.; ribosomal... | 0.07 | Orthogroups_2024-Update | |
MA_57835g0010 | No alias | (at3g46040 : 223.0) Regulated by TCP20.; ribosomal... | 0.08 | Orthogroups_2024-Update | |
Mp8g06510.1 | No alias | component RPS15a of SSU proteome | 0.06 | Orthogroups_2024-Update | |
Mp8g13010.1 | No alias | component RPS15a of SSU proteome | 0.04 | Orthogroups_2024-Update | |
PSME_00001830-RA | No alias | (at5g59850 : 244.0) Ribosomal protein S8 family protein;... | 0.03 | Orthogroups_2024-Update | |
PSME_00015526-RA | No alias | (at5g59850 : 244.0) Ribosomal protein S8 family protein;... | 0.1 | Orthogroups_2024-Update | |
PSME_00039858-RA | No alias | (at5g59850 : 234.0) Ribosomal protein S8 family protein;... | 0.01 | Orthogroups_2024-Update | |
Potri.001G118100 | No alias | ribosomal protein S15A | 0.04 | Orthogroups_2024-Update | |
Potri.010G208700 | No alias | Ribosomal protein S8 family protein | 0.03 | Orthogroups_2024-Update | |
Pp1s115_101V6 | No alias | 40s ribosomal protein s15a | 0.09 | Orthogroups_2024-Update | |
Pp1s1_304V6 | No alias | 40s ribosomal protein s15a | 0.03 | Orthogroups_2024-Update | |
Pp1s426_18V6 | No alias | 40s ribosomal protein s15a | 0.06 | Orthogroups_2024-Update | |
Pp1s45_88V6 | No alias | 40s ribosomal protein s15a | 0.08 | Orthogroups_2024-Update | |
Pp1s61_209V6 | No alias | 40s ribosomal protein s15a | 0.05 | Orthogroups_2024-Update | |
Seita.2G319400.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.12 | Orthogroups_2024-Update | |
Seita.4G092300.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
Seita.5G374600.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Seita.8G174900.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Sobic.003G012700.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.09 | Orthogroups_2024-Update | |
Sobic.007G212600.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.11 | Orthogroups_2024-Update | |
Sopen04g025860 | No alias | Ribosomal protein S8 | 0.08 | Orthogroups_2024-Update | |
Sopen04g026010 | No alias | Ribosomal protein S8 | 0.03 | Orthogroups_2024-Update | |
Sopen04g026020 | No alias | Ribosomal protein S8 | 0.13 | Orthogroups_2024-Update | |
evm.model.contig_2045.5 | No alias | (at5g59850 : 190.0) Ribosomal protein S8 family protein;... | 0.12 | Orthogroups_2024-Update | |
evm.model.tig00000158.110 | No alias | (q9at34|rs15a_dauca : 210.0) 40S ribosomal protein S15a... | 0.12 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEP | Predicted GO |
CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Predicted GO |
BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003725 | double-stranded RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003922 | GMP synthase (glutamine-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
CC | GO:0005680 | anaphase-promoting complex | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006177 | GMP biosynthetic process | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
BP | GO:0009116 | nucleoside metabolic process | IEP | Predicted GO |
BP | GO:0009119 | ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0009163 | nucleoside biosynthetic process | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016597 | amino acid binding | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0030488 | tRNA methylation | IEP | Predicted GO |
CC | GO:0030684 | preribosome | IEP | Predicted GO |
MF | GO:0031406 | carboxylic acid binding | IEP | Predicted GO |
CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Predicted GO |
CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Predicted GO |
CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
CC | GO:0034708 | methyltransferase complex | IEP | Predicted GO |
BP | GO:0042278 | purine nucleoside metabolic process | IEP | Predicted GO |
BP | GO:0042451 | purine nucleoside biosynthetic process | IEP | Predicted GO |
BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | Predicted GO |
BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
MF | GO:0043177 | organic acid binding | IEP | Predicted GO |
CC | GO:0043527 | tRNA methyltransferase complex | IEP | Predicted GO |
BP | GO:0045048 | protein insertion into ER membrane | IEP | Predicted GO |
BP | GO:0046037 | GMP metabolic process | IEP | Predicted GO |
BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0046129 | purine ribonucleoside biosynthetic process | IEP | Predicted GO |
MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Predicted GO |
BP | GO:0051205 | protein insertion into membrane | IEP | Predicted GO |
BP | GO:0051641 | cellular localization | IEP | Predicted GO |
BP | GO:0071816 | tail-anchored membrane protein insertion into ER membrane | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:1901070 | guanosine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | Predicted GO |
BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Predicted GO |
CC | GO:1990234 | transferase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000630 | Ribosomal_S8 | 58 | 181 |
No external refs found! |