HORVU3Hr1G086930.1


Description : component *(uS8) of small ribosomal-subunit (SSU) proteome


Gene families : OG_42_0001161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001161_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G086930.1
Cluster HCAA Clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
228163 No alias Ribosomal protein S8 family protein 0.06 Orthogroups_2024-Update
At5g59850 No alias AT1G07770 protein [Source:UniProtKB/TrEMBL;Acc:B9DI04] 0.04 Orthogroups_2024-Update
Bradi2g23110 No alias ribosomal protein S15A 0.12 Orthogroups_2024-Update
Bradi2g54450 No alias ribosomal protein S15A 0.14 Orthogroups_2024-Update
Brara.B01062.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.14 Orthogroups_2024-Update
Brara.C01067.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.19 Orthogroups_2024-Update
Brara.F00468.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Brara.J01354.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Cre05.g234637 No alias Ribosomal protein S8 family protein 0.12 Orthogroups_2024-Update
GRMZM2G083497 No alias ribosomal protein S15A 0.09 Orthogroups_2024-Update
Glyma.07G255500 No alias ribosomal protein S15A 0.06 Orthogroups_2024-Update
Glyma.11G003600 No alias ribosomal protein S15A 0.05 Orthogroups_2024-Update
Glyma.11G003700 No alias ribosomal protein S15A 0.05 Orthogroups_2024-Update
Glyma.15G102550 No alias ribosomal protein S15A 0.06 Orthogroups_2024-Update
Glyma.17G018600 No alias ribosomal protein S15A 0.1 Orthogroups_2024-Update
HORVU1Hr1G072060.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Kfl00864_0040 kfl00864_0040_v1.1 (at5g59850 : 230.0) Ribosomal protein S8 family protein;... 0.04 Orthogroups_2024-Update
LOC_Os02g27760 No alias 40S ribosomal protein S15a, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g10720 No alias 40S ribosomal protein S15a, putative, expressed 0.04 Orthogroups_2024-Update
MA_10427318g0020 No alias (at3g46040 : 214.0) Regulated by TCP20.; ribosomal... 0.07 Orthogroups_2024-Update
MA_57835g0010 No alias (at3g46040 : 223.0) Regulated by TCP20.; ribosomal... 0.08 Orthogroups_2024-Update
Mp8g06510.1 No alias component RPS15a of SSU proteome 0.06 Orthogroups_2024-Update
Mp8g13010.1 No alias component RPS15a of SSU proteome 0.04 Orthogroups_2024-Update
PSME_00001830-RA No alias (at5g59850 : 244.0) Ribosomal protein S8 family protein;... 0.03 Orthogroups_2024-Update
PSME_00015526-RA No alias (at5g59850 : 244.0) Ribosomal protein S8 family protein;... 0.1 Orthogroups_2024-Update
PSME_00039858-RA No alias (at5g59850 : 234.0) Ribosomal protein S8 family protein;... 0.01 Orthogroups_2024-Update
Potri.001G118100 No alias ribosomal protein S15A 0.04 Orthogroups_2024-Update
Potri.010G208700 No alias Ribosomal protein S8 family protein 0.03 Orthogroups_2024-Update
Pp1s115_101V6 No alias 40s ribosomal protein s15a 0.09 Orthogroups_2024-Update
Pp1s1_304V6 No alias 40s ribosomal protein s15a 0.03 Orthogroups_2024-Update
Pp1s426_18V6 No alias 40s ribosomal protein s15a 0.06 Orthogroups_2024-Update
Pp1s45_88V6 No alias 40s ribosomal protein s15a 0.08 Orthogroups_2024-Update
Pp1s61_209V6 No alias 40s ribosomal protein s15a 0.05 Orthogroups_2024-Update
Seita.2G319400.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Seita.4G092300.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Seita.5G374600.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Seita.8G174900.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Sobic.003G012700.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Sobic.007G212600.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Sopen04g025860 No alias Ribosomal protein S8 0.08 Orthogroups_2024-Update
Sopen04g026010 No alias Ribosomal protein S8 0.03 Orthogroups_2024-Update
Sopen04g026020 No alias Ribosomal protein S8 0.13 Orthogroups_2024-Update
evm.model.contig_2045.5 No alias (at5g59850 : 190.0) Ribosomal protein S8 family protein;... 0.12 Orthogroups_2024-Update
evm.model.tig00000158.110 No alias (q9at34|rs15a_dauca : 210.0) 40S ribosomal protein S15a... 0.12 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006177 GMP biosynthetic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009163 nucleoside biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0042451 purine nucleoside biosynthetic process IEP Predicted GO
BP GO:0042455 ribonucleoside biosynthetic process IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:0045048 protein insertion into ER membrane IEP Predicted GO
BP GO:0046037 GMP metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901070 guanosine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901659 glycosyl compound biosynthetic process IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 58 181
No external refs found!