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  5. HORVU3Hr1G089000.2

HORVU3Hr1G089000.2


Description : Unknown function


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G089000.2
Cluster HCAA Clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
A4A49_31911 No alias 4-coumarate--coa ligase-like 6 0.02 Orthogroups_2024-Update
A4A49_41306 No alias 4-coumarate--coa ligase 2 0.04 Orthogroups_2024-Update
At1g20500 No alias 4-coumarate--CoA ligase-like 4... 0.02 Orthogroups_2024-Update
At1g65060 No alias 4-coumarate--CoA ligase 3... 0.03 Orthogroups_2024-Update
At5g63380 No alias 4-coumarate--CoA ligase-like 9... 0.04 Orthogroups_2024-Update
Bradi2g57860 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Bradi3g52350 No alias 4-coumarate:CoA ligase 3 0.04 Orthogroups_2024-Update
Bradi5g04760 No alias acyl-CoA synthetase 5 0.03 Orthogroups_2024-Update
Brara.C03823.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
GRMZM2G096020 No alias OPC-8:0 CoA ligase1 0.03 Orthogroups_2024-Update
GRMZM2G174732 No alias 4-coumarate:CoA ligase 2 0.02 Orthogroups_2024-Update
Glyma.13G323000 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Glyma.14G223200 No alias OPC-8:0 CoA ligase1 0.02 Orthogroups_2024-Update
LOC_Os03g05780 No alias 4-coumarate--CoA ligase-like 7, putative, expressed 0.04 Orthogroups_2024-Update
PSME_00026145-RA No alias (at4g05160 : 454.0) Encodes a peroxisomal protein... 0.02 Orthogroups_2024-Update
Potri.T071600 No alias 4-coumarate:CoA ligase 5 0.03 Orthogroups_2024-Update
Pp1s185_66V6 No alias 4-coumarate: ligase 0.02 Orthogroups_2024-Update
Seita.1G065800.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Seita.6G093400.1 No alias p-coumarate 0.02 Orthogroups_2024-Update
Seita.6G167900.1 No alias p-coumarate 0.05 Orthogroups_2024-Update
Sobic.004G272700.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Sobic.010G214900.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Solyc03g097030 No alias 4-coumarate--CoA ligase 0.03 Orthogroups_2024-Update
Solyc03g111170 No alias 4-coumarate:CoA ligase-like protein (AHRD V3.3 *** G7J515_MEDTR) 0.04 Orthogroups_2024-Update
Solyc03g117870 No alias 4-coumarate--CoA ligase 0.06 Orthogroups_2024-Update
Solyc06g068650 No alias 4-coumarate--CoA ligase 0.06 Orthogroups_2024-Update
Solyc11g069050 No alias 4-coumarate:CoA ligase-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen03g001090 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update
Sopen03g036780 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update
Sopen06g025930 No alias AMP-binding enzyme 0.04 Orthogroups_2024-Update
Sopen07g004250 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update
Sopen12g021460 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0010024 phytochromobilin biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0050897 cobalt ion binding IEP Predicted GO
BP GO:0051202 phytochromobilin metabolic process IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 84 484
IPR025110 AMP-bd_C 493 568
No external refs found!