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  5. At3g07490

At3g07490


Description : CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]


Gene families : OG_42_0000821 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g07490
Cluster HCCA clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
A4A49_27262 No alias calmodulin-like protein 3 0.04 Orthogroups_2024-Update
Glyma.17G112000 No alias Calcium-binding EF-hand family protein 0.05 Orthogroups_2024-Update
MA_10289213g0010 No alias (at3g07490 : 115.0) A member of ARF GAP domain (AGD), A... 0.02 Orthogroups_2024-Update
MA_6883323g0010 No alias (at3g07490 : 102.0) A member of ARF GAP domain (AGD), A... 0.05 Orthogroups_2024-Update
Mp6g20440.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.04 Orthogroups_2024-Update
Potri.002G077300 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
Sobic.006G131600.1 No alias calcium sensor *(CML) 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 76 142
IPR002048 EF_hand_dom 5 66
No external refs found!