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  5. HORVU3Hr1G092610.1

HORVU3Hr1G092610.1


Description : regulatory RNA helicase *(RH20/RH30) of virus replication


Gene families : OG_42_0000814 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G092610.1
Cluster HCAA Clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
98552 No alias DEA(D/H)-box RNA helicase family protein 0.02 Orthogroups_2024-Update
Bradi2g04460 No alias DEAD box RNA helicase 1 0.02 Orthogroups_2024-Update
Bradi2g05990 No alias DEA(D/H)-box RNA helicase family protein 0.03 Orthogroups_2024-Update
GRMZM2G703415 No alias DEAD box RNA helicase family protein 0.03 Orthogroups_2024-Update
Glyma.07G010500 No alias DEA(D/H)-box RNA helicase family protein 0.02 Orthogroups_2024-Update
Glyma.09G031100 No alias DEAD box RNA helicase family protein 0.02 Orthogroups_2024-Update
LOC_Os01g68320 No alias DEAD-box ATP-dependent RNA helicase 30, putative, expressed 0.02 Orthogroups_2024-Update
Mp3g07940.1 No alias pre-mRNA splicing regulator (DDX5) 0.02 Orthogroups_2024-Update
PSME_00034125-RA No alias (at3g06480 : 620.0) DEAD box RNA helicase family... 0.02 Orthogroups_2024-Update
Sobic.003G397800.1 No alias regulatory RNA helicase *(RH20/RH30) of virus replication 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 385 494
IPR011545 DEAD/DEAH_box_helicase_dom 178 349
No external refs found!