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  5. HORVU3Hr1G095400.2

HORVU3Hr1G095400.2


Description : circadian clock activation factor *(TCP20) & TCP-type transcription factor


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G095400.2
Cluster HCAA Clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
At5g08330 No alias Transcription factor TCP21... 0.03 Orthogroups_2024-Update
GRMZM2G113888 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.04 Orthogroups_2024-Update
Glyma.09G284300 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update
LOC_Os11g07460 No alias TCP family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Seita.1G246200.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.03 Orthogroups_2024-Update
Seita.7G288200.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.010G092100.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005542 folic acid binding IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 235 445
No external refs found!