At3g07830

Description : Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SFD1]

Gene families : OG_42_0000512 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000512_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At3g07830
Cluster	HCCA clusters: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
A4A49_25931	No alias	polygalacturonase	0.03	Orthogroups_2024-Update
At1g43080	No alias	Glycoside hydrolase family 28 protein...	0.03	Orthogroups_2024-Update
At2g15470	No alias	Pectin lyase-like superfamily protein...	0.04	Orthogroups_2024-Update
At3g07840	No alias	Pectin lyase-like superfamily protein...	0.05	Orthogroups_2024-Update
Brara.D02006.1	No alias	EC_3.2 glycosylase	0.04	Orthogroups_2024-Update
Brara.F03031.1	No alias	EC_3.2 glycosylase	0.03	Orthogroups_2024-Update
GRMZM2G151755	No alias	Pectin lyase-like superfamily protein	0.02	Orthogroups_2024-Update
Potri.009G038100	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Solyc07g056290	No alias	Pectin lyase-like superfamily protein (AHRD V3.3 *** AT1G78400.1)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008378	galactosyltransferase activity	IEP	Predicted GO
MF	GO:0016759	cellulose synthase activity	IEP	Predicted GO
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Predicted GO
BP	GO:0030243	cellulose metabolic process	IEP	Predicted GO
BP	GO:0030244	cellulose biosynthetic process	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	48	376

External Links

No external refs found!