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At3g07850


Description : Exopolygalacturonase clone GBGA483 [Source:UniProtKB/Swiss-Prot;Acc:P49063]


Gene families : OG_42_0000512 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000512_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g07850
Cluster HCCA clusters: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
A4A49_25931 No alias polygalacturonase 0.05 Orthogroups_2024-Update
At1g43080 No alias Glycoside hydrolase family 28 protein... 0.03 Orthogroups_2024-Update
At5g48140 No alias At5g48140 [Source:UniProtKB/TrEMBL;Acc:Q9LUB8] 0.04 Orthogroups_2024-Update
Brara.F01203.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.G00223.1 No alias pectin lyase & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Glyma.14G006100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G169100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 101 424
No external refs found!