Description : At3g08000 [Source:UniProtKB/TrEMBL;Acc:Q9SFB4]
Gene families : OG_42_0000107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000107_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At3g08000 | |
Cluster | HCCA clusters: Cluster_50 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre17.g729150 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.02 | Orthogroups_2024-Update | |
MA_27149g0010 | No alias | (at5g61030 : 116.0) encodes a glycine-rich RNA binding... | 0.02 | Orthogroups_2024-Update | |
Mp1g18780.1 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.02 | Orthogroups_2024-Update | |
Pp1s45_280V6 | No alias | glycine-rich rna-binding | 0.02 | Orthogroups_2024-Update | |
Seita.5G173500.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Solyc10g047130 | No alias | Glycine-rich RNA-binding protein (AHRD V3.3 *** A0A0B0NTU5_GOSAR) | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_2015.16 | No alias | (q08937|roc2_nicsy : 89.4) 29 kDa ribonucleoprotein B,... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Predicted GO |
BP | GO:0002376 | immune system process | IEP | Predicted GO |
MF | GO:0003756 | protein disulfide isomerase activity | IEP | Predicted GO |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Predicted GO |
CC | GO:0005779 | integral component of peroxisomal membrane | IEP | Predicted GO |
CC | GO:0005783 | endoplasmic reticulum | IEP | Predicted GO |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Predicted GO |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Predicted GO |
BP | GO:0006405 | RNA export from nucleus | IEP | Predicted GO |
BP | GO:0006406 | mRNA export from nucleus | IEP | Predicted GO |
BP | GO:0006955 | immune response | IEP | Predicted GO |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Predicted GO |
CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | Predicted GO |
BP | GO:0016559 | peroxisome fission | IEP | Predicted GO |
MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Predicted GO |
MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | Predicted GO |
MF | GO:0016864 | intramolecular oxidoreductase activity, transposing S-S bonds | IEP | Predicted GO |
CC | GO:0031231 | intrinsic component of peroxisomal membrane | IEP | Predicted GO |
CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Predicted GO |
CC | GO:0031301 | integral component of organelle membrane | IEP | Predicted GO |
BP | GO:0034220 | ion transmembrane transport | IEP | Predicted GO |
BP | GO:0043248 | proteasome assembly | IEP | Predicted GO |
CC | GO:0044438 | microbody part | IEP | Predicted GO |
CC | GO:0044439 | peroxisomal part | IEP | Predicted GO |
BP | GO:0045087 | innate immune response | IEP | Predicted GO |
BP | GO:0048285 | organelle fission | IEP | Predicted GO |
BP | GO:0050657 | nucleic acid transport | IEP | Predicted GO |
BP | GO:0050658 | RNA transport | IEP | Predicted GO |
BP | GO:0051028 | mRNA transport | IEP | Predicted GO |
BP | GO:0051168 | nuclear export | IEP | Predicted GO |
BP | GO:0051236 | establishment of RNA localization | IEP | Predicted GO |
MF | GO:0051287 | NAD binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 43 | 113 |
No external refs found! |