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  5. HORVU3Hr1G108360.4

HORVU3Hr1G108360.4


Description : UMP synthase *(UMPS)


Gene families : OG_42_0004351 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004351_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G108360.4
Cluster HCAA Clusters: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
448325 No alias uridine 5\'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) 0.02 Orthogroups_2024-Update
LOC_Os01g72240 No alias uridine 5-monophosphate synthase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g72250 No alias uridine 5-monophosphate synthase, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEA 16Dec
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR000836 PRibTrfase_dom 67 160
IPR001754 OMPdeCOase_dom 248 467
No external refs found!