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  5. HORVU3Hr1G110900.1

HORVU3Hr1G110900.1


Description : Unknown function


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G110900.1
Cluster HCAA Clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
A4A49_33897 No alias polyubiquitin 12 0.02 Orthogroups_2024-Update
At4g02890 No alias Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8] 0.03 Orthogroups_2024-Update
At5g03240 No alias Ubiquitin 4 [Source:UniProtKB/TrEMBL;Acc:A0A1P8BGQ7] 0.02 Orthogroups_2024-Update
HORVU4Hr1G065100.3 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
HORVU7Hr1G103330.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
MA_10431748g0020 No alias (at5g03240 : 437.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
MA_10754g0010 No alias (at4g05050 : 167.0) polyubiquitin gene, belongs to a... 0.03 Orthogroups_2024-Update
Potri.001G263000 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Potri.007G067500 No alias related to ubiquitin 1 0.03 Orthogroups_2024-Update
Seita.1G086300.1 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Solyc12g098940 No alias Ubiquitin, putative (AHRD V3.3 *** B9RN74_RICCO) 0.03 Orthogroups_2024-Update
Sopen11g001600 No alias Ubiquitin family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 77 142
IPR000626 Ubiquitin_dom 153 222
IPR000626 Ubiquitin_dom 6 66
No external refs found!