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  5. At3g08930

At3g08930


Description : LIMR family protein At3g08930 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR93]


Gene families : OG_42_0003396 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003396_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g08930
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Bradi1g49650 No alias LMBR1-like membrane protein 0.02 Orthogroups_2024-Update
Seita.4G017700.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0017053 transcriptional repressor complex IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
CC GO:0070176 DRM complex IEP Predicted GO
CC GO:0090568 nuclear transcriptional repressor complex IEP Predicted GO
CC GO:0090571 RNA polymerase II transcription repressor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006876 LMBR1-like_membr_prot 277 487
IPR006876 LMBR1-like_membr_prot 9 274
No external refs found!