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Description : component *(ADA3) of SAGA transcription co-activator complex
Gene families : OG_42_0001470 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001470_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU3Hr1G113130.1 | |
| Cluster | HCAA Clusters: Cluster_34 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi2g61842 | No alias | Function unknown | 0.05 | Orthogroups_2024-Update | |
| Glyma.09G066400 | No alias | Function unknown | 0.04 | Orthogroups_2024-Update | |
| PSME_00024678-RA | No alias | (at4g29790 : 534.0) unknown protein; BEST Arabidopsis... | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G422500.1 | No alias | component *(ADA3) of SAGA transcription co-activator complex | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003729 | mRNA binding | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| MF | GO:0005543 | phospholipid binding | IEP | Predicted GO |
| CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
| BP | GO:0008612 | peptidyl-lysine modification to peptidyl-hypusine | IEP | Predicted GO |
| BP | GO:0009314 | response to radiation | IEP | Predicted GO |
| BP | GO:0009411 | response to UV | IEP | Predicted GO |
| BP | GO:0009416 | response to light stimulus | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Predicted GO |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Predicted GO |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | Predicted GO |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Predicted GO |
| CC | GO:0035145 | exon-exon junction complex | IEP | Predicted GO |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
| MF | GO:0043130 | ubiquitin binding | IEP | Predicted GO |
| CC | GO:0044428 | nuclear part | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |