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  5. HORVU3Hr1G116350.2

HORVU3Hr1G116350.2


Description : E3 ubiquitin ligase *(XBAT3)


Gene families : OG_42_0001761 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G116350.2
Cluster HCAA Clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
441660 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.02 Orthogroups_2024-Update
Brara.C02396.1 No alias E3 ubiquitin ligase *(XBAT3) 0.03 Orthogroups_2024-Update
GRMZM2G016668 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.03 Orthogroups_2024-Update
GRMZM2G103270 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.03 Orthogroups_2024-Update
GRMZM2G113002 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.03 Orthogroups_2024-Update
Glyma.11G140000 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.02 Orthogroups_2024-Update
Glyma.15G039100 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.02 Orthogroups_2024-Update
LOC_Os01g74320 No alias ubiquitin ligase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.009G030000 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.03 Orthogroups_2024-Update
Sobic.003G444900.1 No alias E3 ubiquitin ligase *(XBAT3) 0.03 Orthogroups_2024-Update
Solyc06g076050 No alias Ankyrin repeat family protein (AHRD V3.3 *** B9GJP4_POPTR) 0.04 Orthogroups_2024-Update
Solyc11g066020 No alias Ankyrin repeat family protein (AHRD V3.3 *** B9GJP4_POPTR) 0.04 Orthogroups_2024-Update
Sopen11g025760 No alias Ankyrin repeats (3 copies) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 197 222
IPR002110 Ankyrin_rpt 114 184
No external refs found!