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  5. HORVU3Hr1G116550.5

HORVU3Hr1G116550.5


Description : histone *(H2A)


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G116550.5
Cluster HCAA Clusters: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
73637 No alias gamma histone variant H2AX 0.02 Orthogroups_2024-Update
At5g54640 No alias Histone H2A.6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD28] 0.03 Orthogroups_2024-Update
Bradi1g25400 No alias histone H2A 2 0.03 Orthogroups_2024-Update
GRMZM2G151826 No alias histone H2A 2 0.03 Orthogroups_2024-Update
HORVU6Hr1G092390.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
LOC_Os03g51200 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.02 Orthogroups_2024-Update
MA_93628g0020 No alias (q2hu68|h2a1_medtr : 174.0) Probable histone H2A.1 -... 0.02 Orthogroups_2024-Update
Sobic.008G114500.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 90 122
IPR007125 Histone_H2A/H2B/H3 8 86
No external refs found!