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  5. HORVU4Hr1G002160.1

HORVU4Hr1G002160.1


Description : Unknown function


Gene families : OG_42_0000144 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G002160.1
Cluster HCAA Clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
A4A49_37593 No alias ft-interacting protein 1 0.02 Orthogroups_2024-Update
At3g61300 No alias Anthranilate phosphoribosyltransferase-like protein... 0.03 Orthogroups_2024-Update
MA_5279581g0010 No alias (at5g12970 : 292.0) Calcium-dependent lipid-binding... 0.04 Orthogroups_2024-Update
PSME_00013531-RA No alias (at3g57880 : 1233.0) Calcium-dependent lipid-binding... 0.03 Orthogroups_2024-Update
PSME_00054309-RA No alias (at3g57880 : 953.0) Calcium-dependent lipid-binding... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013583 PRibTrfase_C 961 1116
IPR000008 C2_dom 534 644
IPR000008 C2_dom 374 479
IPR000008 C2_dom 77 173
IPR000008 C2_dom 701 813
No external refs found!