HORVU4Hr1G004280.3


Description : TCX/CPP-type transcription factor


Gene families : OG_42_0001867 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001867_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G004280.3
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
HORVU5Hr1G012950.6 No alias TCX/CPP-type transcription factor 0.04 Orthogroups_2024-Update
Potri.005G051100 No alias Tesmin/TSO1-like CXC domain-containing protein 0.03 Orthogroups_2024-Update
Sobic.002G050700.2 No alias TCX/CPP-type transcription factor 0.03 Orthogroups_2024-Update
Solyc09g082500 No alias Tesmin/TSO1-like CXC domain protein (AHRD V3.3 *** G7K3P9_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005172 CRC 473 508
IPR005172 CRC 559 594
No external refs found!