1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU4Hr1G005660.6

HORVU4Hr1G005660.6


Description : cytokinin phosphoribohydrolase *(LOG)


Gene families : OG_42_0000308 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000308_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G005660.6
Cluster HCAA Clusters: Cluster_331

Target Alias Description ECC score Gene Family Method Actions
At2g35990 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.03 Orthogroups_2024-Update
At4g35190 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.02 Orthogroups_2024-Update
At5g26140 No alias Putative lysine decarboxylase family protein... 0.03 Orthogroups_2024-Update
HORVU2Hr1G089620.5 No alias cytokinin phosphoribohydrolase *(LOG) 0.03 Orthogroups_2024-Update
Kfl00647_0030 kfl00647_0030_v1.1 (at2g37210 : 233.0) Encodes a protein of unknown... 0.01 Orthogroups_2024-Update
LOC_Os05g46360 No alias possible lysine decarboxylase domain containing protein,... 0.03 Orthogroups_2024-Update
Sobic.009G254900.1 No alias cytokinin phosphoribohydrolase *(LOG) 0.04 Orthogroups_2024-Update
Solyc01g005680 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006788 heme oxidation IEP Predicted GO
CC GO:0009539 photosystem II reaction center IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR031100 LOG_fam 63 193
No external refs found!