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At3g09790


Description : Polyubiquitin 8 [Source:UniProtKB/Swiss-Prot;Acc:Q39256]


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g09790
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G014970.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G016150.3 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
LOC_Os09g31019 No alias ubiquitin fusion protein, putative, expressed 0.03 Orthogroups_2024-Update
Seita.3G398300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g064130 No alias Polyubiquitin (AHRD V3.3 *** UBI1P_NICSY) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 471 548
IPR000626 Ubiquitin_dom 554 625
IPR000626 Ubiquitin_dom 81 151
IPR000626 Ubiquitin_dom 321 392
IPR000626 Ubiquitin_dom 395 464
IPR000626 Ubiquitin_dom 8 76
IPR000626 Ubiquitin_dom 157 235
IPR000626 Ubiquitin_dom 240 315
No external refs found!