HORVU4Hr1G011370.8


Description : poly(A) RNA polymerase


Gene families : OG_42_0001415 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001415_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G011370.8
Cluster HCAA Clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Kfl00261_0030 kfl00261_0030_v1.1 (at4g32850 : 625.0) Encodes a nuclear poly(A)... 0.02 Orthogroups_2024-Update
LOC_Os06g36360 No alias expressed protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
MF GO:0004652 polynucleotide adenylyltransferase activity IEA 16Dec
MF GO:0016779 nucleotidyltransferase activity IEA 16Dec
BP GO:0043631 RNA polyadenylation IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007012 PolA_pol_cen_dom 10 226
IPR007010 PolA_pol_RNA-bd_dom 383 441
IPR002934 Polymerase_NTP_transf_dom 83 133
IPR007012 PolA_pol_cen_dom 229 380
No external refs found!