1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU4Hr1G011420.3

HORVU4Hr1G011420.3


Description : Unknown function


Gene families : OG_42_0008246 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008246_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G011420.3
Cluster HCAA Clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g28600 No alias PPR repeat domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
Sobic.001G333000.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 661 694
IPR002885 Pentatricopeptide_repeat 808 852
IPR002885 Pentatricopeptide_repeat 490 538
IPR002885 Pentatricopeptide_repeat 1015 1059
IPR002885 Pentatricopeptide_repeat 878 922
IPR002885 Pentatricopeptide_repeat 1085 1125
IPR002885 Pentatricopeptide_repeat 948 993
IPR002885 Pentatricopeptide_repeat 386 431
IPR002885 Pentatricopeptide_repeat 598 644
IPR002885 Pentatricopeptide_repeat 565 592
IPR033443 PPR_long 203 332
No external refs found!