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  5. HORVU4Hr1G014100.3

HORVU4Hr1G014100.3


Description : component *(eIF3b) of eIF3 mRNA-to-PIC binding complex


Gene families : OG_42_0004354 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004354_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G014100.3
Cluster HCAA Clusters: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
Bradi4g40280 No alias translation initiation factor 3B1 0.03 Orthogroups_2024-Update
Cre03.g190100 No alias eukaryotic translation initiation factor 3B-2 0.02 Orthogroups_2024-Update
Glyma.07G107700 No alias translation initiation factor 3B1 0.03 Orthogroups_2024-Update
Kfl00604_0090 kfl00604_0090_v1.1 (at5g27640 : 798.0) encodes a member of eukaryotic... 0.02 Orthogroups_2024-Update
Pp1s130_248V6 No alias eukaryotic translation initiation factor 3 0.03 Orthogroups_2024-Update
Pp1s138_36V6 No alias eukaryotic translation initiation factor 3 0.03 Orthogroups_2024-Update
Seita.9G315300.1 No alias component *(eIF3b) of eIF3 mRNA-to-PIC binding complex 0.04 Orthogroups_2024-Update
Solyc01g088370 No alias Eukaryotic translation initiation factor 3 subunit B... 0.03 Orthogroups_2024-Update
evm.model.contig_4406.11 No alias (p56821|if39_tobac : 424.0) Eukaryotic translation... 0.02 Orthogroups_2024-Update
evm.model.tig00020848.60 No alias (at5g25780 : 644.0) member of eIF3b - eukaryotic... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 79 138
IPR013979 TIF_beta_prop-like 407 608
No external refs found!