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  5. HORVU4Hr1G014130.1

HORVU4Hr1G014130.1


Description : component *(eS27) of small ribosomal-subunit (SSU) proteome


Gene families : OG_42_0001909 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001909_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G014130.1
Cluster HCAA Clusters: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
163947 No alias ribosomal protein S27 0.03 Orthogroups_2024-Update
A4A49_15619 No alias 40s ribosomal protein s27-2 0.05 Orthogroups_2024-Update
At2g45710 No alias 40S ribosomal protein S27-1... 0.07 Orthogroups_2024-Update
Bradi3g43475 No alias ribosomal protein S27 0.05 Orthogroups_2024-Update
Bradi5g08453 No alias ribosomal protein S27 0.05 Orthogroups_2024-Update
Brara.B03416.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Brara.F03041.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Brara.G01908.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Brara.I00365.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Brara.I04203.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Cre02.g145250 No alias ribosomal protein S27 0.01 Orthogroups_2024-Update
Cre12.g529400 No alias ribosomal protein S27 0.1 Orthogroups_2024-Update
GRMZM2G066222 No alias ribosomal protein S27 0.05 Orthogroups_2024-Update
Glyma.16G046500 No alias ribosomal protein S27 0.02 Orthogroups_2024-Update
Glyma.19G105700 No alias ribosomal protein S27 0.06 Orthogroups_2024-Update
HORVU7Hr1G112740.4 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
LOC_Os04g27860 No alias 40S ribosomal protein S27, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g32710 No alias 40S ribosomal protein S27, putative, expressed 0.03 Orthogroups_2024-Update
MA_87055g0010 No alias (at3g61110 : 146.0) Arabidopsis ribosomal protein;... 0.03 Orthogroups_2024-Update
Mp5g09510.1 No alias component RPS27 of SSU proteome 0.03 Orthogroups_2024-Update
PSME_00029823-RA No alias (at3g61110 : 146.0) Arabidopsis ribosomal protein;... 0.06 Orthogroups_2024-Update
Potri.003G161200 No alias ribosomal protein S27 0.06 Orthogroups_2024-Update
Pp1s165_39V6 No alias 40s ribosomal protein 0.08 Orthogroups_2024-Update
Pp1s17_304V6 No alias 40s ribosomal protein 0.06 Orthogroups_2024-Update
Pp1s63_161V6 No alias 40s ribosomal protein 0.07 Orthogroups_2024-Update
Seita.1G160500.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Sobic.001G091801.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.14 Orthogroups_2024-Update
Sobic.004G145801.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Solyc01g008090 No alias 40S ribosomal protein S27 (AHRD V3.3 *-* M0TJU4_MUSAM) 0.09 Orthogroups_2024-Update
Sopen01g003640 No alias Ribosomal protein S27 0.08 Orthogroups_2024-Update
evm.model.tig00001299.2 No alias (at5g47930 : 145.0) Zinc-binding ribosomal protein... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0010011 auxin binding IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0042562 hormone binding IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27e 30 84
No external refs found!