HORVU4Hr1G014530.1

Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly

Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU4Hr1G014530.1
Cluster	HCAA Clusters: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc02g089130	No alias	COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO)	0.04	Orthogroups_2024-Update
Solyc03g114900	No alias	Protein COBRA, putative (AHRD V3.3 *** B9RLK9_RICCO)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010215	cellulose microfibril organization	IEA	16Dec
CC	GO:0016020	membrane	IEA	16Dec
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0030198	extracellular matrix organization	None	Extended
BP	GO:0043062	extracellular structure organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005759	mitochondrial matrix	IEP	Predicted GO
BP	GO:0016255	attachment of GPI anchor to protein	IEP	Predicted GO
CC	GO:0031974	membrane-enclosed lumen	IEP	Predicted GO
CC	GO:0042765	GPI-anchor transamidase complex	IEP	Predicted GO
CC	GO:0043233	organelle lumen	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044429	mitochondrial part	IEP	Predicted GO
CC	GO:0044432	endoplasmic reticulum part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
CC	GO:0070013	intracellular organelle lumen	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006918	COBRA_pln	56	220

External Links

No external refs found!