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  5. HORVU4Hr1G016720.1

HORVU4Hr1G016720.1


Description : Unknown function


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G016720.1
Cluster HCAA Clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
462 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
70183 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
A4A49_13653 No alias pentatricopeptide repeat-containing protein 0.05 Orthogroups_2024-Update
Bradi5g12970 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.02G160400 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G024180.8 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.6G207200.1 No alias RNA editing factor *(REME1) 0.06 Orthogroups_2024-Update
Seita.7G042500.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.7G277600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G200500.3 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G025100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G187600.1 No alias processivity component *(REV7) of DNA polymerase zeta complex 0.03 Orthogroups_2024-Update
Sobic.010G088200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen02g019790 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen07g003070 No alias PPR repeat 0.03 Orthogroups_2024-Update
Sopen12g021390 No alias PPR repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 368 393
IPR002885 Pentatricopeptide_repeat 232 255
IPR002885 Pentatricopeptide_repeat 191 215
IPR002885 Pentatricopeptide_repeat 163 188
IPR002885 Pentatricopeptide_repeat 292 340
No external refs found!