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  5. HORVU4Hr1G019780.1

HORVU4Hr1G019780.1


Description : long-chain acyl-CoA synthetase *(LACS9) & EC_6.2 ligase forming carbon-sulfur bond


Gene families : OG_42_0001983 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001983_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G019780.1
Cluster HCAA Clusters: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G079236 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 101 565
No external refs found!