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  5. At3g10260

At3g10260


Description : Reticulon family protein [Source:TAIR;Acc:AT3G10260]


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g10260
Cluster HCCA clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
A4A49_10852 No alias reticulon-like protein b9 0.04 Orthogroups_2024-Update
A4A49_13570 No alias reticulon-like protein b9 0.03 Orthogroups_2024-Update
A4A49_27853 No alias reticulon-like protein b9 0.04 Orthogroups_2024-Update
MA_58851g0010 No alias (at3g10260 : 256.0) Reticulon family protein; CONTAINS... 0.03 Orthogroups_2024-Update
Pp1s351_49V6 No alias seed maturation protein 0.03 Orthogroups_2024-Update
Pp1s37_13V6 No alias seed maturation protein 0.02 Orthogroups_2024-Update
evm.model.contig_2198.1 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
CC GO:0000930 gamma-tubulin complex IEP Predicted GO
CC GO:0000931 gamma-tubulin large complex IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004061 arylformamidase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006569 tryptophan catabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
CC GO:0008274 gamma-tubulin ring complex IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009074 aromatic amino acid family catabolic process IEP Predicted GO
BP GO:0009310 amine catabolic process IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0016093 polyprenol metabolic process IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Predicted GO
BP GO:0019348 dolichol metabolic process IEP Predicted GO
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Predicted GO
BP GO:0031503 protein-containing complex localization IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033566 gamma-tubulin complex localization IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0034629 cellular protein-containing complex localization IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042402 cellular biogenic amine catabolic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0042436 indole-containing compound catabolic process IEP Predicted GO
BP GO:0042537 benzene-containing compound metabolic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044450 microtubule organizing center part IEP Predicted GO
BP GO:0046218 indolalkylamine catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0047750 cholestenol delta-isomerase activity IEP Predicted GO
CC GO:0061617 MICOS complex IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0070189 kynurenine metabolic process IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003388 Reticulon 62 215
No external refs found!