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  5. HORVU4Hr1G022950.11

HORVU4Hr1G022950.11


Description : lytic vacuole protein sorting receptor *(VSR)


Gene families : OG_42_0000754 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU4Hr1G022950.11
Cluster HCAA Clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
Bradi1g31820 No alias VACUOLAR SORTING RECEPTOR 6 0.04 Orthogroups_2024-Update
GRMZM2G115660 No alias VACUOLAR SORTING RECEPTOR 6 0.03 Orthogroups_2024-Update
LOC_Os11g02464 No alias vacuolar-sorting receptor precursor, putative, expressed 0.02 Orthogroups_2024-Update
Seita.7G233300.1 No alias lytic vacuole protein sorting receptor *(VSR) 0.05 Orthogroups_2024-Update
Seita.9G413100.1 No alias lytic vacuole protein sorting receptor *(VSR) 0.03 Orthogroups_2024-Update
Sobic.006G211300.1 No alias lytic vacuole protein sorting receptor *(VSR) 0.04 Orthogroups_2024-Update
Solyc10g074980 No alias Vacuolar sorting receptor family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen02g026600 No alias PA domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003137 PA_domain 70 165
No external refs found!