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Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU4Hr1G025400.1 | |
| Cluster | HCAA Clusters: Cluster_315 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_19370 | No alias | ring-h2 finger protein atl70 | 0.01 | Orthogroups_2024-Update | |
| At1g72220 | No alias | RING-H2 finger protein ATL54... | 0.02 | Orthogroups_2024-Update | |
| At5g41450 | No alias | RING/U-box superfamily protein... | 0.03 | Orthogroups_2024-Update | |
| Bradi4g32634 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi5g19960 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.F02864.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Brara.G01336.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Glyma.10G289100 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU2Hr1G094840.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G087960.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU5Hr1G121280.7 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| HORVU6Hr1G077610.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G042940.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os04g37740 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os06g11450 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os12g42530 | No alias | expressed protein | 0.02 | Orthogroups_2024-Update | |
| MA_227897g0010 | No alias | (at3g16720 : 112.0) RING-H2 protein induced after... | 0.03 | Orthogroups_2024-Update | |
| MA_98187g0010 | No alias | (at1g72200 : 119.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| PSME_00003016-RA | No alias | (at1g72200 : 114.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| Potri.019G091400 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Seita.1G197400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.1G197600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.1G306500.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Seita.2G237900.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Seita.3G227200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Seita.9G410900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G181200.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Sobic.004G283400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G301300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc04g009780 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) | 0.02 | Orthogroups_2024-Update | |
| Solyc11g006450 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) | 0.04 | Orthogroups_2024-Update | |
| evm.model.contig_474.3 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00020563.21 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004129 | cytochrome-c oxidase activity | IEP | Predicted GO |
| MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
| MF | GO:0008146 | sulfotransferase activity | IEP | Predicted GO |
| MF | GO:0015002 | heme-copper terminal oxidase activity | IEP | Predicted GO |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Predicted GO |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Predicted GO |
| MF | GO:0016675 | oxidoreductase activity, acting on a heme group of donors | IEP | Predicted GO |
| MF | GO:0016676 | oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor | IEP | Predicted GO |
| MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Predicted GO |
| BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 137 | 180 |
| No external refs found! |